- by /u/r2platformsubmitted by /u/r2platform [link] [comments]
- by /u/Disastrous_Echo_5501It's a arrange marriage thing but I really want to ensure that I can communicate that hey, i am here, and i am willing to learn about your world and if that means talking genomics then be it!!! submitted by /u/Disastrous_Echo_5501 [link] [comments]
- by /u/r2platformsubmitted by /u/r2platform [link] [comments]
- by /u/columbus_123I am aware of several genome collections (Decode, Ukbiobank, Truveta). Do you know any such projects where the video of participants is available? submitted by /u/columbus_123 [link] [comments]
- by /u/gwernsubmitted by /u/gwern [link] [comments]
- by /u/gwernsubmitted by /u/gwern [link] [comments]
- by /u/JoymxxxI found that I have rs1800462 genotype CC. Do I understand that this means that it might cause problems with the metabolism of thiopurines? submitted by /u/Joymxxx [link] [comments]
- by /u/nina_becHi all, I ran both a Qualimap Bamqc report and Samtools stats on the same exact WGS sample of a bee genome mapped to a reference genome, and I've noticed some discrepancies between the two analyses. Specifically: Samtools stats: 1st fragments: 17,660,083 Last fragments: 17,660,083 Qualimap Bamqc: Number of mapped paired reads (first in pair): 17,335,392 Number of mapped paired reads (second in pair): 17,307,852 Samtools stats: Bases duplicated: 0 Qualimap Bamqc: Duplication rate: 19.26% Samtools stats: Insert size average: 559.8 Qualimap Bamqc: Mean insert size: 17,604.199 How is it possible for these reports to differ so much on these […]
- by /u/Some_Surprise8929Hi all, I’m 27 and have been working as a software engineer for 7.5 years, with experience in software sales. I received my software engineering certificate from General Assembly in 2017. Recently, I’ve become very interested in genetics and am considering transitioning into this field. Genetics has been a passion of mine for as long as I can remember. I’d often talk to my uncle, who’s a plant geneticist running his own company focused on wheat and oats genetics, about the field. He’d even joke with my dad that I knew more about human genetics than he did! (He works […]
- by /u/burtzevsubmitted by /u/burtzev [link] [comments]
- by /u/Any-Regular2960Three years ago during Covid Genomic companies were being flooded with money from investors. Then the rug was pulled. Now we are in limbo waiting for the next Chat Gpt-like moment. Of course Fda approvals have occured and diseases have been cured. Progress in genomics is inevitable, in my opinion. Anyone can see the immense investment into genomics with multimillion dollar facilities being built around the United States. So the question is, what will be the big trigger to show its the future of medicine? submitted by /u/Any-Regular2960 [link] [comments]
- by /u/nina_becHi everyone, I’m currently working on mapping genomes to a reference genome using Minimap2 and have ended up with BAM and BAI files. After the mapping step, I’ve used Samtools and some other QC tools to analyze the data, but I’m a bit unsure about what to do next and whether I’ve missed any important steps. Here’s an overview of what I’ve done so far: Mapping: I used Minimap2 to map the genomes to a reference genome. QC: Generated stats using samtools stats. Ran Qualimap on each BAM file. Analyzed MAPQ score distribution with awk and samtools view. Extracted depth […]
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