- by /u/New-Philosophy-1998submitted by /u/New-Philosophy-1998 [link] [comments]
- by /u/PurpleSwordF1shHey everyone, I'm currently about to start a scRNA-seq (Seurat v5) project soon and was thinking of using multiple GEO datasets I found to run the analysis for immune markers, but I tried a variety of ways….. can someone tell me the best, also speciifc way to properly download the datasets and put them into my R program, I was having a lot of trouble with formatting, preparing, etc submitted by /u/PurpleSwordF1sh [link] [comments]
- by /u/Large_Tower_1050Hello, I am new to GWAS and genomics in general. My aim is to identify QTL associated with grain weight in a legume and then later potentially follow it up with fine mapping etc. I have grain samples for approximately 300 genotypes grown at two field trials. I would like to know if I should use phenotyping method #1 or method #2 below and, in particular, whether there are fundamental flaws in method #2 that make it illogical to use in terms of the resultant GWAS or the phenotyping in general. It is important you first know about the sampling […]
- by /u/hz1brtHey! Has anyone used any of the KingFisher machines from Thermofisher! I have a few questions I wanted to ask for some research. Would love to have a quick chat if you have time! submitted by /u/hz1brt [link] [comments]
- by /u/Holodoxasubmitted by /u/Holodoxa [link] [comments]
- by /u/PsychologicalAd2170submitted by /u/PsychologicalAd2170 [link] [comments]
- by /u/perfect_fifthsWhich means I have TRPS, which is not surprising, five generations of my family has it but my kid a d I were the first one to be identified because I put my sons pic in face2gene and it came back with a hit, and then subsequent searches about it via clinical journals was like reasons a story of my life. My genetic mutation is c.2179_2180del (deletes two base pairs) which appears once in a clinical journal, and no databases have much info on it. I know it’s a frameshift mutation, and disease causing and it’s why I have TRPS. […]
- by /u/Longjumping-Shake128In gnomAD, rs199953230 in TNXB is reported with an allele frequency ≈ 0.06308 (6.308%). But since I’m homozygous the frequency changes to under 0.4% according to the Hardy Weinberg genetics accounting rule. Could this homozygous result potentially indicate a TNXB deficiency? submitted by /u/Longjumping-Shake128 [link] [comments]
- by /u/gwernsubmitted by /u/gwern [link] [comments]
- by /u/OnyxOpaliteWanting recommendations on a WGS test that’ll look at my dna completely, and find any medical health diseases I might have. I had a “WGS” done on the NHS a few years back, Although I’ve since found out although it was wgs, the lab only checked for what the dr specifically asked for, (around 20 diseases) so many diseases wouldn’t have been looked at. People have recommended sequencing and nebula, but I don’t know much about them. Someone else recommended 23 and me, but I feel like it probably won’t tell me much and so may be better to do […]
- by /u/ayefreireIs it worth trying? Or should I buy promethease? I would rather not spend any money submitted by /u/ayefreire [link] [comments]
- by /u/wanzerultimateWhat is the known utility of math for sequence editing? In particular I'd like to know what would be helpful for applications such as hybridized animal organs (for human transplant). Also I'm aware statistics are used… more interested in math beyond that, if it's applicable. If you could point me to a list somewhere or a particular search engine with appropriate keywords, that would be most helpful. submitted by /u/wanzerultimate [link] [comments]
Mass spectrometry websites, social media, journal feeds, and other links and items of interest to the mass spectrometry community.
