#Proteomics

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    Peptide-Level Biomarker as a New Direction for Blood-Based Testing: Evaluation of Plasma Proteome Variability Induced by Prolonged on-Ice Storage https://pubs.acs.org/doi/10.1021/acs.jproteome.5c00245—#proteomics #prot-paper
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    News in Proteomics Research blog post | How does time blood spends on ice alter the proteome? At least some important proteins absolutely change! https://proteomicsnews.blogspot.com/2025/12/how-does-time-blood-spends-on-ice-alter.html—#proteomics #prot-other
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    The Finnish Mass Spectrometry Regional Issue https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/mas.70018?af=R—#proteomics #prot-paper
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    ProteoForge: An Imputation-Aware Framework for Differential Proteoform Discovery in Bottom-Up Proteomics https://www.biorxiv.org/content/10.64898/2025.12.12.694008v1.full.pdf+html—#proteomics #prot-preprint
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    Middle-down proteomics: the pursuit for longer peptides https://www.tandfonline.com/doi/full/10.1080/14789450.2025.2604157#d1e191—#proteomics #prot-paper
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    Limited Proteolysis-Coupled Mass Spectrometry (LiP-MS): A Cutting-Edge Tool for De Novo Drug Target Discovery https://pubs.acs.org/doi/10.1021/acs.jproteome.5c00565—#proteomics #prot-paper
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    Accurate de novo sequencing of the modified proteome with OmniNovo https://arxiv.org/abs/2512.12272—#proteomics #prot-preprint
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    LCMSpector: A simple open-source viewer for targeted hyphenated mass spectrometry analysis https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1013095—#proteomics #prot-paper
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    🎓 Don’t miss our last training course of 2025!Differential Proteomics Training📍 University of Antwerp📅 Dec 17, 2025 • 9:00 AM–noonLearn to identify & quantify DDA/DIA proteomes using FragPipe & FragPipe Analyst. Get hands-on with LC-MS/MS data and discover how to detect differential protein expression in real datasets!🔗 Details & preparation: https://www.denbi.de/training-courses-2025/2002-differential-proteomics-training#Proteomics #Bioinformatics #deNBI #Antwerp #FragPipe #LCMSMS #ProteinAnalysis
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    Semi-supervised Bayesian integration of multiple spatial proteomics datasets https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1013799—#proteomics #prot-paper
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    Improving Peak Capacity in Glycan Ion Mobility Separations through Traveling Wave-Based Ion Heating https://pubs.acs.org/doi/10.1021/jasms.5c00323—#proteomics #prot-paper
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    Data‐Independent Acquisition Mass Spectrometry in Tumor Classification and Cancer Biomarker Research https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/mas.70014?af=R—#proteomics #prot-paper

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