- We're hiring: POSTDOC in BIOINFORMATICS: Study the role of the gut #microbiome in the development of #immune tolerance. #multiomics #bioinformatics #metabolomics #Baltimore @medschool.umaryland.edu@bsky.brid.gy Learn more/Apply: bit.ly/bioinfoCAMRI
- Finally had some time and energy today to cut some aluminium profiles to build a frame for the #massspectrometer.Still a long way to go, tomorrow I really need to clean up the room and a table for it to stand on.Annoying built of the vacuum chamber only had screw holes on one side. Thankfully the walls are 20mm thick, so drilling 10mm holes into the other side and cutting threads in was a valid option. Was afraid the 20mm beams would be too weak but standing like this it's actually quite stable.#lcms #lcmsms #massspectrometry #science #research #diy #laboratory #toxicology #metabolomics […]
- Mathematical modelling led by @tsukushi_kamiya reveals the role of #nutrients in the stability of the vaginal #microbiota in a way that is consistent with #genomics and #metabolomics data shared by Jacques Ravel. This is one of the rare #models on this understudied #microbiome. https://doi.org/10.1371/journal.pbio.3003575🙏 Thanks to the #FRM for funding Tsukushi's post-doctoral fellowship and to @PeerCommunityIn for the #open peer-review process ( @PLOSBiology editors did not require any additional review!).
- New preprint!An Integrated Multi-omic Analysis Reveals Novel Gene-Metabolite Relationships in Human Steatohepatitic Hepatocellular Carcinomahttps://www.medrxiv.org/content/10.64898/2026.01.28.26344977v1Colleagues took paired samples of hepatocellularcarcinoma from several patients (8), and did bulk RNA-Seq, lipidomics, and metabolomics on the samples.We analyzed the data to see what was different in each modality, as well as what correlations could be found between RNA-Seq and metabolomics.#Bioinformatics #Metabolomics
- Y'all. I was having a full on Pikachu face today when I found discrepancies in what metabolites were included in my datasets and what were included in a colleagues datasets when we processed identical experiments from Metabolomics Workbench (I am borrowing some stuff they did with the exact same experiments to supplement my own work).Digging into it, I'm removing things that are missing across more than X number of samples, the colleague kept everything. 😮💨#Metabolomics #Bioinformatics
- New lab paper is out! We've released our python package mwtab v2 for interacting with the Metabolomics Workbench (MW) website, and updated the file status website with some measures of issues with the data available from MW!A Major Update and Improved Validation Functionality in the mwtab Python Library and the Metabolomics Workbench File Status Websitehttps://doi.org/10.3390/metabo16010076If you want a programmatic way to get data from MW, this might be useful.#Bioinformatics #Metabolomics
- #metabolomics postdoc "The exact focus will be tailored to the candidate’s strengths and evolving opportunities in the field." https://jobs.ethz.ch/job/view/JOPG_ethz_1gSP4dmYD54u5EqbLs
- #Cancer immunotherapy is a type of cancer treatment that harnesses the #immune system to fight cancer cells. The treatment involves #CD8⁺ T cells, also known as killer T cells, which play a crucial role in attacking #tumors #Immunology #Oncology #Metabolomics #sflorghttps://www.sflorg.com/2026/01/imgy01212601.html
- 🔬 Join our first training course in 2026📅 13 January | 💻 Online👨🏫 Educators: Timo Sachsenberg & Tom Müller (CIBI)🌟 Get an overview of the OpenMS ecosystem🧬 Discover automation, customization, & reproducibility with pyOpenMS✨ Explore untargeted metabolomics workflows like UMetaFlowPerfect for metabolomics researchers, students, and anyone curious about programmable MS data analysis!🔗 https://www.denbi.de/training-courses-2026/2008-pyopenms-for-metabolomics#Metabolomics #OpenMS #pyOpenMS #UMetaFlow #Bioinformatics #Python #OpenScience
- This year's @bioconductor Biological Data Science Summer School in Brixen, South Tyrol (the 22nd edition!) takes place 24-29 May 2026.We cover (sc)-RNA-seq and #spatial #omics analysis, underlying (bio)statistical topics, #multiomics, #proteomics and #metabolomics, and also programmatic interaction from #Rstats with LLMs, all very hands-on using R/Bioconductor tools.https://csama2026.bioconductor.eu/Registration opens on 1 Feb.
- Dr. David Wishart is one of Canada’s most acclaimed scientists, a pioneer in the field of metabolomics. Debby Waldman is an award-winning children’s author. When a Métis trapper’s son met a New York rabbi’s daughter? Let’s just say there was chemistry. Meet this delightful couple in this latest Alberta Unbound. https://podcasts.apple.com/ca/podcast/alberta-unbound/id1511810939?i=1000740687005 #AlbertaUnbound #ualberta #yeg #Edmonton #Alberta #abpoli #cdnpoli #metabolomics #NSERC #TMIC
- 🧬🌱 IPB Halle and @sneumann lab seek a Research Associate in Computational Metabolomics (E13 TV-L, full-time, m/f/d)!#Bioinformatics, R, Python, stats & #metabolomics. Join an international team!Apply by 22 Dec 2025🔗 More: https://www.denbi.de/de-nbi-jobs-portal/1985-research-associate-computational-metabolomics-m-f-d-21-2025 #jobs #openjobs #jobseaker
Mass spectrometry websites, social media, journal feeds, and other links and items of interest to the mass spectrometry community.
