Molecular methods to study protein trafficking between organs

Proteomics (Wiley) Wiley: PROTEOMICS: Table of Contents Table of Contents for PROTEOMICS. List of articles from both the latest and EarlyView issues. Molecular methods to study protein trafficking between organs Abstract Interorgan communication networks are key regulators of organismal homeostasis, and their dysregulation is associated with a variety of pathologies. While mass spectrometry proteomics identifies …

Front Cover

Proteomics (Wiley) Wiley: PROTEOMICS: Table of Contents Table of Contents for PROTEOMICS. List of articles from both the latest and EarlyView issues. Front Cover Cover Image © Wiley-VCH GmbH. The image is part of a figure in the article DOI: 10.1002/pmic.201900203 by Lei Li, Yong Jiang et al. March 15, 2023 https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/pmic.202370041?af=R

Contents: Proteomics 6’23

Proteomics (Wiley) Wiley: PROTEOMICS: Table of Contents Table of Contents for PROTEOMICS. List of articles from both the latest and EarlyView issues. Contents: Proteomics 6’23 PROTEOMICS, Volume 23, Issue 6, March 2023. March 15, 2023 https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/pmic.202370043?af=R

Standard abbreviations

Proteomics (Wiley) Wiley: PROTEOMICS: Table of Contents Table of Contents for PROTEOMICS. List of articles from both the latest and EarlyView issues. Standard abbreviations PROTEOMICS, Volume 23, Issue 6, March 2023. March 15, 2023 https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/pmic.202370044?af=R

Post-mortem muscle proteome of crossbred bulls and steers: Relationships with carcass and meat quality

Journal of Proteomics ScienceDirect Publication: Journal of Proteomics ScienceDirect RSS Post-mortem muscle proteome of crossbred bulls and steers: Relationships with carcass and meat quality Publication date: 30 April 2023 Source: Journal of Proteomics, Volume 278 Author(s): Bismarck Santiago, Welder Baldassini, Otávio Machado Neto, Luis Artur Chardulo, Rodrigo Torres, Guilherme Pereira, Rogério Curi, Marcos Roberto Chiaratti, …

A transformer architecture for retention time prediction in liquid chromatography mass spectrometry‐based proteomics

Proteomics (Wiley) Wiley: PROTEOMICS: Table of Contents Table of Contents for PROTEOMICS. List of articles from both the latest and EarlyView issues. A transformer architecture for retention time prediction in liquid chromatography mass spectrometry‐based proteomics Abstract Accurate retention time prediction is important for spectral library-based analysis in data-independent acquisition mass spectrometry-based proteomics. The deep learning …

iTRAQ‐based proteomic analysis reveals proteins associated with cold stress response in two different populations of Manila clam (Ruditapes philippinarum)

Proteomics (Wiley) Wiley: PROTEOMICS: Table of Contents Table of Contents for PROTEOMICS. List of articles from both the latest and EarlyView issues. iTRAQ‐based proteomic analysis reveals proteins associated with cold stress response in two different populations of Manila clam (Ruditapes philippinarum) Abstract Water temperature is one of the key environmental factors for marine ectotherms and …

Identifying dynamical persistent biomarker structures for rare events using modern integrative machine learning approach

Proteomics (Wiley) Wiley: PROTEOMICS: Table of Contents Table of Contents for PROTEOMICS. List of articles from both the latest and EarlyView issues. Identifying dynamical persistent biomarker structures for rare events using modern integrative machine learning approach Abstract The evolution of omics and computational competency has accelerated discoveries of the underlying biological processes in an unprecedented …

Potential biomarker proteins for aspiration pneumonia detected by shotgun proteomics using buccal mucosa samples: a cross-sectional case–control study

Clinical Proteomics Most Recent Articles: Clinical Proteomics Most Recent Articles: Clinical Proteomics Potential biomarker proteins for aspiration pneumonia detected by shotgun proteomics using buccal mucosa samples: a cross-sectional case–control study Aspiration pneumonia (AP), which is a major cause of death in the elderly, does present with typical symptoms in the early stages of onset, thus …

[ASAP] Comparison of Database Searching Programs for the Analysis of Single-Cell Proteomics Data

Journal of Proteome Research Journal of Proteome Research: Latest Articles (ACS Publications) latest articles published in Journal of Proteome Research [ASAP] Comparison of Database Searching Programs for the Analysis of Single-Cell Proteomics Data Journal of Proteome Research DOI: 10.1021/acs.jproteome.2c00821 Jiaxi Peng, Calvin Chan, Fei Meng, Yechen Hu, Lingfan Chen, Ge Lin, Shen Zhang, and Aaron …

Biochemical network analysis of protein-protein interactions to follow-up T1 bladder cancer patients

Journal of Proteomics ScienceDirect Publication: Journal of Proteomics ScienceDirect RSS Biochemical network analysis of protein-protein interactions to follow-up T1 bladder cancer patients Publication date: 30 April 2023 Source: Journal of Proteomics, Volume 278 Author(s): Luís B. Carvalho, José Luis Capelo Martínez, Carlos Lodeiro, Rafael Bento, Rajiv Dhir, Jeremiah J. Morrissey, Luis Campos Pinheiro, Mariana Medeiros, …

Towards the discovery of goat meat quality biomarkers using label-free proteomics

Journal of Proteomics ScienceDirect Publication: Journal of Proteomics ScienceDirect RSS Towards the discovery of goat meat quality biomarkers using label-free proteomics Publication date: 30 April 2023 Source: Journal of Proteomics, Volume 278 Author(s): Melisa Lamri, Antonella della Malva, Djamel Djenane, María López-Pedrouso, Daniel Franco, Marzia Albenzio, José M. Lorenzo, Mohammed Gagaoua March 9, 2023 https://www.sciencedirect.com/science/article/pii/S187439192300057X?dgcid=rss_sd_all

[ASAP] IP-LC-MSMS Enables Identification of Three Tau O‑GlcNAcylation Sites as O‑GlcNAcase Inhibition Pharmacodynamic Readout in Transgenic Mice Overexpressing Human Tau

Journal of Proteome Research Journal of Proteome Research: Latest Articles (ACS Publications) latest articles published in Journal of Proteome Research [ASAP] IP-LC-MSMS Enables Identification of Three Tau O‑GlcNAcylation Sites as O‑GlcNAcase Inhibition Pharmacodynamic Readout in Transgenic Mice Overexpressing Human Tau Journal of Proteome Research DOI: 10.1021/acs.jproteome.2c00822 Sebastiaan Bijttebier, Dina Rodrigues Martins, Liesbeth Mertens, Karolien Grauwen, …

[ASAP] Comparison of Pairwise Venous and Fingertip Plasma Using Quantitative Proteomics Based on Data-Independent Acquisition

Journal of Proteome Research Journal of Proteome Research: Latest Articles (ACS Publications) latest articles published in Journal of Proteome Research [ASAP] Comparison of Pairwise Venous and Fingertip Plasma Using Quantitative Proteomics Based on Data-Independent Acquisition Journal of Proteome Research DOI: 10.1021/acs.jproteome.3c00081 Ganfei Xu, Jiacheng Lv, Mingjing Huang, Lingli Zhu, Subei Tan, and Chen Ding March …

[ASAP] Identification, Measurement, and Assessment of the Clinical Utility of Human Pancreatic Polypeptide by Liquid Chromatography–Tandem Mass Spectrometry

Journal of Proteome Research Journal of Proteome Research: Latest Articles (ACS Publications) latest articles published in Journal of Proteome Research [ASAP] Identification, Measurement, and Assessment of the Clinical Utility of Human Pancreatic Polypeptide by Liquid Chromatography–Tandem Mass Spectrometry Journal of Proteome Research DOI: 10.1021/acs.jproteome.2c00829 Anthony Maus, Erica M. Fatica, Robert Taylor, Bethany J. Larson, Alicia …

Age-stratified proteomic characteristics and identification of promising precise clinical treatment targets of colorectal cancer

Journal of Proteomics ScienceDirect Publication: Journal of Proteomics ScienceDirect RSS Age-stratified proteomic characteristics and identification of promising precise clinical treatment targets of colorectal cancer Publication date: 15 April 2023 Source: Journal of Proteomics, Volume 277 Author(s): Qianqian Wang, Yuanchen Zhou, Geyujia Zhou, Geng Qin, Chang Tan, Tengfei Yin, Dongyan Zhao, Shukun Yao March 7, 2023 …

Proteomic analysis reveals CAAP1 negatively correlates with platinum resistance in ovarian cancer

Journal of Proteomics ScienceDirect Publication: Journal of Proteomics ScienceDirect RSS Proteomic analysis reveals CAAP1 negatively correlates with platinum resistance in ovarian cancer Publication date: 15 April 2023 Source: Journal of Proteomics, Volume 277 Author(s): Maowei Ni, Jie Zhou, Wangang Gong, Ruibin Jiang, Xia Li, Wumin Dai, Zhuomin Yin, Zhongbo Chen, Zhiguo Zheng, Jianqing Zhu March …

A gas phase fractionation acquisition scheme integrating ion mobility for rapid diaPASEF library generation

Proteomics (Wiley) Wiley: PROTEOMICS: Table of Contents Table of Contents for PROTEOMICS. List of articles from both the latest and EarlyView issues. A gas phase fractionation acquisition scheme integrating ion mobility for rapid diaPASEF library generation Abstract Data independent acquisition (DIA/SWATH) MS is a primary strategy in quantitative proteomics. diaPASEF is a recent adaptation using …

[ASAP] Large-Scale Profiling of Unexpected Tryptic Cleaved Sites at Ubiquitinated Lysines

Journal of Proteome Research Journal of Proteome Research: Latest Articles (ACS Publications) latest articles published in Journal of Proteome Research [ASAP] Large-Scale Profiling of Unexpected Tryptic Cleaved Sites at Ubiquitinated Lysines Journal of Proteome Research DOI: 10.1021/acs.jproteome.2c00748 Zhen Sun, Weidi Xiao, Naikang Li, Lei Chang, Ping Xu, and Yanchang Li March 6, 2023 http://dx.doi.org/10.1021/acs.jproteome.2c00748