Prosolia is now marketing a retrofit Desorption Electrospray Ionization interface.
Peer Reviewing Wikipedia
One of the most often heard responses to complaints about incorrect information in Wikipedia is “Stop complaining and fix it.” But many of those who would be willing to fix it are turned off because Wikipedia can be anti-expert with Byzantine rules of conduct that favor the rude and determined. Fixing Wikipedia doesn’t work if your contributions are removed in an edit war. Some people thrive on that kind of contest, but most academics prefer a review by their peers and, when faced with the reality of Wikipedia, choose to opt out.
But the Wikipedia vs. peer review dichotomy is a false one. Since the material on Wikipedia is available through the GNU Free Document License, anyone is free to take any fraction of Wikipedia behind a peer review firewall as long as the peer-reviewed material is itself made available through the GNU FDL. Trying to peer review the several million Wikipedia articles is a Herculean task but peer reviewing the fewer than 100 Wikipedia articles on mass spectrometry is quite reasonable, especially if you are familiar with the Mediawiki software.
I have been using Mediawiki for a few years now and serve my group webpage and MS Terms site with the software. It was fairly easy to create a Mass Spectrometry Wiki and pull the pages from the Wikipedia mass spectrometry category into it. Mediawiki is set up for interwiki links, so it is trivial to direct non-mass spectrometry links from the articles out to Wikipedia. Since I have the administrator password, I am now the Benevolent Dictator of the pages in the Mass Spectrometry Wiki. Since I am pro-expert and anti-anonymous editing, I have the wiki set up so that only logged-in users can edit pages and only existing users can create user accounts. If you are a mass spectrometry expert, contact me and I will set up an account for you with your name and contact information. If you like the Wikipedia way, edit Wikipedia. If you want to be your own Benevolent Dictator, set up your own Mediawiki installation or find a site that does Wiki hosting.
Taken to the extreme, there could be dozens of competing wikis with mass spectrometry or other information and various editing philosophies. In this situation, the goodness of the information is a function of the trust that the reader has in the provider of the information, not the ease with which the information is obtained.
Open Access: ACS and ASMS
BioCurious Blog comments on American Chemical Society President E. Ann Nalley’s recent letter arguing against open access to journal articles that report on research funded by the NIH. Nalley objects to the “available after six months” policy, arguing that it will lead to lost revenues. It’s still too early to guage the effect on journal profits, but all issues of the Journal of the American Society of Mass Spectrometry are openly availble after one year. The flip side of open access is that it may lead to increased readership and higher impact factor, both of which can increase publisher profits.
Volatiles in Tequila by GC
Mass Spectrometry at FACSS
There are just a few more days (April 28th) to submit an abstract for the FACSS meeting in Orlando September 24th through 28th, 2006. This will be the first FACSS with official ASMS participation.
MALDI Beats Electrospray
In a MALDI vs. electrospray GoogleBattle anyway (via).
Wikipedia: Mass-to-Charge Ratio
There is an interesting mass-to-charge ratio discussion on Wikipedia that illustrates a point I brought up in my ACS presentation last month (see also the Nature/Wikipedia/Britanica imbroglio). Wikipedia is open to editing by anyone and is peer reviewed only if ones peers choose to review and edit it. It will be interesting to see whether the scientific community embraces or rejects (or some combination) the open source approach to scientific information on the internet.
Mass Spectrometry for Surgeons
MIT Technology Review has an article on spatially resolved mass spectrometry and the potential for real-time tissue profiling during surgery. Mass spectrometrists may be wearing scrubs in the near future. (via).
MetaBlogging
I didn’t know that Chemical and Engineering News was blogging the 2006 Atlanta ACS meeting until I got a rare trackback citing my presentation from last week. Nature Publishing was there as well with Nature Newsblog and the scepticalchymist.
Mapping Mass Spectrometry Research Groups
Platial.com is a combination (mashup) of Google Maps and shared tagging. I made a map for mass spectrometry groups and put in a few entries. Feel free to put in your own group and location (you will need to sign up, but it’s free).
Blogs for Analytical Chemists
Here’s my presentation “Blogs for Analytical Chemists” from the spring 2006 American Chemical Society meeting in Atlanta (presented March 29th).
METLIN Metabolite Database
METLIN is a database system for metabolite identification by mass spectrometry. An article on the technique, XCMS: Processing Mass Spectrometry Data for Metabolite Profiling Using Nonlinear Peak Alignment, Matching, and Identification, just came out in the Analytical Chemistry. Software binaries are available for Windows and Mac OS X.
Britannica Responds to Nature on Wikipedia Comparison
Encyclopaedia Britannica has published a response (PDF article) to Nature regarding their comparison of the accuracy of the online Encyclopaedia Britannica with Wikipedia (via > via). Interested readers can conduct their own comparison of the “Mass Spectrometry” entries on Britanica (registration required) and Wikipedia.
Standard Definitions of Terms Relating to Mass Spectrometry – Second Draft
Second Draft (PDF) of the IUPAC Standard Definitions of Terms Relating to Mass Spectrometry is now available. You can leave comments on the Mass Spectrometry Terms Forum. Note that the PDF document contains the latest terms and definitions and discussion should be based on those entries. Some Wiki entries still need updating.
Wiley Mass Spectral Data 8th Edition
The 8th Edition of the Wiley Registry of Mass Spectral Data comes out in April (via).
Waters and Bruker to Collaborate
Waters (LC) and Bruker (MS, NMR) announced a collaboration on LC/MS and LC/NMR (via).
Varian Buys IonSpec
Insrument manufacturer Varian, Inc. announced that it would acquire the Fourier Transform mass spectrometry company IonSpec Corporation (via).
Agilent’s New ESI-TOF
Agilent introduced a new benchtop electrospray time-of-flight mass spectrometer today (via).
Proteomics of Beer
The Manitoban Online has an article on the proteomics of the malt barley found in Canadian beer.
Using ICP-MS to Find Hit-and-Run Vehicles
Capabilities of laser ablation—inductively coupled plasma mass spectrometry for (trace) element analysis of car paints for forensic purposes in the Journal of Analytical Atomic Spectrometry.