{"id":1166,"date":"2016-11-15T14:33:52","date_gmt":"2016-11-15T20:33:52","guid":{"rendered":"https:\/\/kermitmurray.com\/research\/?page_id=1166"},"modified":"2019-06-25T21:27:47","modified_gmt":"2019-06-26T02:27:47","slug":"maldi","status":"publish","type":"page","link":"https:\/\/kermitmurray.com\/research\/maldi\/","title":{"rendered":"MALDI Mechanism Bibliography"},"content":{"rendered":"
MALDI Mechanism Papers<\/div><\/div>\n

(1) Juhasz, P.; Costello, C. E. Generation of Large Radical Ions From Oligometallocenes by Matrix-Assisted Laser Desorption Ionization. 1993<\/b>, 7<\/i>, 343\u2013351.<\/p>\n

(2) Grigorean, G.; Carey, R. I.; Amster, I. J. Studies of Exchangeable Protons in the Matrix-Assisted Laser Desorption\/Ionization Process. European Mass Spectrometry<\/i> 1996<\/b>.<\/p>\n

(3) Cramer, R.; Hillenkamp, F.; Haglund, R. F., Jr. Infrared Matrix-Assisted Laser Desorption and Ionization by Using a Tunable Mid-Infrared Free-Electron Laser. J. Am. Soc. Mass Spectrom.<\/i> 1996<\/b>, 7<\/i>, 1187\u20131193.<\/p>\n

(4) Moniatte, M.; Lesieur, C.; Vecsey-Semjen, B.; Buckley, J.; Pattus, F.; van der Goot, F.; Van Dorsselaer, A. Matrix-Assisted Laser Desorption-Ionization Time-of-Flight Mass Spectrometry in the Subunit Stoichiometry Study of High-Mass Non-Covalent Complexes. Int. J. Mass. Spectrom. and Ion Processes<\/i> 1997<\/b>, 169\/170<\/i>, 179\u2013199.<\/p>\n

(5) Kinsel, G. R.; Edmondson, R.; Russell, D. H. Profile and Flight Time Analysis of Bovine Insulin Clusters as a Probe of Matrix-Assisted Laser Desorption\/Ionization Ion Formation Dynamics. J. Mass Spectrom.<\/i> 1997<\/b>, 32<\/i>, 714\u2013722.<\/p>\n

(6) Tang, W.; Krause, J.; Zhu, L.; Smith, L. M. Factors Influencing Oligonucleotide Stability in Matrix-Assisted Laser Desorption\/Ionization (MALDI) Mass Spectroscopy. Int. J. Mass. Spectrom. and Ion Processes<\/i> 1997<\/b>, 169\/170<\/i>, 301\u2013311.<\/p>\n

(7) Chen, X.; Carroll, J.; Beavis, R. C. Near-Ultraviolet-Induced Matrix-Assisted Laser Desorption\/Ionization as a Function of Wavelength. J. Am. Soc. Mass Spectrom.<\/i> 1998<\/b>, 9<\/i>, 885\u2013891.<\/p>\n

(8) Hess, W.; Park, H.; Yavas, O.; Haglund, R. F., Jr. IR-MALDI of Low Molecular Weight Compounds Using a Free Electron Laser. Appl. Surf. Sci.<\/i> 1998<\/b>, 127-129<\/i>, 235\u2013241.<\/p>\n

(9) Niu, S.; Zhang, W.; Chait, B. T. Direct Comparison of Infrared and Ultraviolet Wavelength Matrix-Assisted Laser Desorption\/Ionization Mass Spectrometry of Proteins. J. Am. Soc. Mass Spectrom.<\/i> 1998<\/b>, 9<\/i>, 1\u20137.<\/p>\n

(10) Land, C. M.; Kinsel, G. R. Investigation of the Mechanism of Intracluster Proton Transfer From Sinapinic Acid to Biomolecular Analytes. J. Am. Soc. Mass Spectrom.<\/i> 1998<\/b>, 9<\/i>, 1060\u20131067.<\/p>\n

(11) Knochenmuss, R.; Vertes, A. Time-Delayed 2-Pulse Studies of MALDI Matrix Ionization Mechanisms. J. Phys. Chem. B<\/i> 2000<\/b>, 104<\/i>, 5406\u20135410.<\/p>\n

(12) Karas, M.; Gl\u00fcckmann, M.; Sch\u00e4fer, J. Ionization in Matrix-Assisted Laser Desorption\/Ionization: Singly Charged Molecular Ions Are the Lucky Survivors. J. Mass Spectrom.<\/i> 2000<\/b>, 35<\/i>, 1\u201312.<\/p>\n

(13) Menzel, C.; Dreisewerd, K.; Berkenkamp, S.; Hillenkamp, F. Mechanisms of Energy Deposition in Infrared Matrix-Assisted Laser Desorption\/Ionization Mass Spectrometry. Int. J. Mass Spectrom.<\/i> 2001<\/b>, 207<\/i>, 73\u201396.<\/p>\n

(14) Lin, Q.; Knochenmuss, R. Two-Photon Ionization Thresholds of Matrix-Assisted Laser Desorption\/Ionization Matrix Clusters. 2001<\/b>, 15<\/i>, 1422\u20131426.<\/p>\n

(15) Golovlev, V.; Lee, S.; Allman, S.; Taranenko, N. I.; Isola, N.; Chen, C. Nonresonant MALDI of Oligonucleotides: Mechanism of Ion Desorption. Anal. Chem.<\/i> 2001<\/b>, 73<\/i>, 809\u2013812.<\/p>\n

(16) Brivio, M.; Fokkens, R.; Verboom, W.; Reinhoudt, D.; Tas, N.; Goedbloed, M.; van den Berg, A. Integrated Microfluidic System Enabling (Bio)Chemical Reactions with on-Line MALDI-TOF Mass Spectrometry. Anal. Chem.<\/i> 2002<\/b>, 74<\/i>, 3972\u20133976.<\/p>\n

(17) Karas, M.; Bahr, U.; Fournier, I.; Gluckmann, M.; Pfenninger, A. The Initial-Ion Velocity as a Marker for Different Desorption-Ionization Mechanisms in MALDI. Int. J. Mass Spectrom.<\/i> 2003<\/b>, 226<\/i>, 239\u2013248.<\/p>\n

(18) Rohlfing, A.; Menzel, C.; Kukreja, L.; Hillenkamp, F.; Dreisewerd, K. Photoacoustic Analysis of Matrix-Assisted Laser Desorption\/Ionization Processes with Pulsed Infrared Lasers. J. Phys. Chem. B<\/i> 2003<\/b>, 107<\/i>, 12275\u201312286.<\/p>\n

(19) Zhang, J.; Frankevich, V.; Knochenmuss, R.; Friess, S.; Zenobi, R. Reduction of Cu(II) in Matrix-Assisted Laser Desorption\/Ionization Mass Spectrometry. J. Am. Soc. Mass Spectrom.<\/i> 2003<\/b>, 14<\/i>, 42\u201350.<\/p>\n

(20) Karas, M.; Kr\u00fcger, R. Ion Formation in MALDI: the Cluster Ionization Mechanism. Chem. Rev.<\/i> 2003<\/b>, 103<\/i>, 427\u2013440.<\/p>\n

(21) Frankevich, V.; Zhang, J.; Friess, S.; Dashtiev, M.; Zenobi, R. Role of Electrons in Laser Desorption\/Ionization Mass Spectrometry. Anal. Chem.<\/i> 2003<\/b>, 75<\/i>, 6063\u20136067.<\/p>\n

(22) Knochenmuss, R. Photoionization Pathways and Free Electrons in UV-MALDI. Anal. Chem.<\/i> 2004<\/b>, 76<\/i>, 3179\u20133184.<\/p>\n

(23) Budimir, N.; Blais, J.-C.; Fournier, F.; Tabet, J.-C. The Use of Desorption\/Ionization on Porous Silicon Mass Spectrometry for the Detection of Negative Ions for Fatty Acids. 2006<\/b>, 20<\/i>, 680\u2013684.<\/p>\n

(24) Altelaar, A. F. M.; Klinkert, I.; Jalink, K.; de Lange, R. P. J.; Adan, R. A. H.; Heeren, R. M.; Piersma, S. R. Gold-Enhanced Biomolecular Surface Imaging of Cells and Tissue by SIMS and MALDI Mass Spectrometry. Anal. Chem.<\/i> 2006<\/b>, 78<\/i>, 734\u2013742.<\/p>\n

(25) Knochenmuss, R. Ion Formation Mechanisms in UV-MALDI. Analyst<\/i> 2006<\/b>, 131<\/i>, 966\u2013986.<\/p>\n

(26) Laiko, V. V.; Taranenko, N. I.; Doroshenko, V. M. On the Mechanism of Ion Formation From the Aqueous Solutions Irradiated with 3 Microm IR Laser Pulses Under Atmospheric Pressure. J. Mass Spectrom.<\/i> 2006<\/b>, 41<\/i>, 1315\u20131321.<\/p>\n

(27) Chang, W.; Huang, L.; Wang, Y.; Peng, W.; Chang, H.; Hsu, N.; Yang, W.; Chen, C. Matrix-Assisted Laser Desorption\/Ionization (MALDI) Mechanism Revisited. Anal. Chim. Acta<\/i> 2007<\/b>, 582<\/i>, 1\u20139.<\/p>\n

(28) Jaskolla, T. W.; Lehmann, W.-D.; Karas, M. 4-Chloro-\u0391-Cyanocinnamic Acid Is an Advanced, Rationally Designed MALDI Matrix. Proc. Natl. Acad. Sci. USA<\/i> 2008<\/b>, 105<\/i>, 12200\u201312205.<\/p>\n

(29) Akhmetov, A.; Moore, J. F.; Gasper, G. L.; Koin, P. J.; Hanley, L. Laser Desorption Postionization for Imaging MS of Biological Material. J. Mass Spectrom.<\/i> 2010<\/b>, 45<\/i>, 137\u2013145.<\/p>\n

(30) Rodthongkum, N.; Chen, Y.; Thayumanavan, S.; Vachet, R. W. Matrix-Assisted Laser Desorption Ionization-Mass Spectrometry Signal Enhancement of Peptides After Selective Extraction with Polymeric Reverse Micelles. Anal. Chem.<\/i> 2010<\/b>, 82<\/i>, 3686\u20133691.<\/p>\n

(31) McEwen, C. N.; Pagnotti, V. S.; Inutan, E. D.; Trimpin, S. New Paradigm in Ionization: Multiply Charged Ion Formation From a Solid Matrix Without a Laser or Voltage. Anal. Chem.<\/i> 2010<\/b>, 82<\/i>, 9164\u20139168.<\/p>\n

(32) Wang, X.; Chang, L.; Sun, Z.; Zhang, Y.; Yao, L. Analysis of Earthworm Eisenia Fetida Proteomes During Cadmium Exposure: an Ecotoxicoproteomics Approach. Proteomics<\/i> 2010<\/b>, 10<\/i>, 4476\u20134490.<\/p>\n

(33) Jaskolla, T. W.; Karas, M. Compelling Evidence for Lucky Survivor and Gas Phase Protonation: the Unified MALDI Analyte Protonation Mechanism. J. Am. Soc. Mass Spectrom.<\/i> 2011<\/b>, 22<\/i>, 976\u2013988.<\/p>\n

(34) Knochenmuss, R.; Zhigilei, L. V. What Determines MALDI Ion Yields? a Molecular Dynamics Study of Ion Loss Mechanisms. Anal. Bioanal. Chem.<\/i> 2012<\/b>, 402<\/i>, 2511\u20132519.<\/p>\n

(35) Frankevich, V.; Nieckarz, R. J.; Sagulenko, P. N.; Barylyuk, K.; Zenobi, R.; Levitsky, L. I.; Agapov, A. Y.; Perlova, T. Y.; Gorshkov, M. V.; Tarasova, I. A. Probing the Mechanisms of Ambient Ionization by Laser-Induced Fluorescence Spectroscopy. 2012<\/b>, 26<\/i>, 1567\u20131572.<\/p>\n

(36) Trimpin, S.; Wang, B.; Inutan, E. D.; Li, J.; Lietz, C. B.; Harron, A.; Pagnotti, V. S.; Sardelis, D.; McEwen, C. N. A Mechanism for Ionization of Nonvolatile Compounds in Mass Spectrometry: Considerations From MALDI and Inlet Ionization. J. Am. Soc. Mass Spectrom.<\/i> 2012<\/b>, 23<\/i>, 1644\u20131660.<\/p>\n

(37) Ahn, S. H.; Park, K. M.; Bae, Y. J.; Kim, M. S. Quantitative Reproducibility of Mass Spectra in Matrix-Assisted Laser Desorption Ionization and Unraveling of the Mechanism for Gas-Phase Peptide Ion Formation. J. Mass Spectrom.<\/i> 2013<\/b>, 48<\/i>, 299\u2013305.<\/p>\n

(38) Chu, K. Y.; Lee, S.; Tsai, M.-T.; Lu, I.-C.; Dyakov, Y. A.; Lai, Y. H.; Lee, Y.-T.; Ni, C.-K. Thermal Proton Transfer Reactions in Ultraviolet Matrix-Assisted Laser Desorption\/Ionization. J. Am. Soc. Mass Spectrom.<\/i> 2014<\/b>, 25<\/i>, 310\u2013318.<\/p>\n

(39) Fujimura, Y.; Miura, D. MALDI Mass Spectrometry Imaging for Visualizing in Situ Metabolism of Endogenous Metabolites and Dietary Phytochemicals. Metabolites<\/i> 2014<\/b>, 4<\/i>, 319\u2013346.<\/p>\n

(40) Kirmess, K. M.; Knochenmuss, R. MALDI Ionization Mechanisms Investigated by Comparison of Isomers of Dihydroxybenzoic Acid. Journal of Mass \u2026<\/i> 2016<\/b>.<\/p>\n

 <\/p>\n

MALDI Imaging<\/div><\/div>\n

(1) Stoeckli, M.; Chaurand, P.; Hallahan, D.; Caprioli, R. M. Imaging Mass Spectrometry: a New Technology for the Analysis of Protein Expression in Mammalian Tissues. Nature Medicine<\/i> 2001<\/b>, 7<\/i>, 493\u20136.<\/p>\n

(2) McDonnell, L.; Heeren, R. M. Imaging Mass Spectrometry. Mass Spectrom. Rev.<\/i> 2007<\/b>, 26<\/i>, 606\u2013643.<\/p>\n

(3) Goodwin, R. J. A.; Pennington, S. R.; Pitt, A. R. Protein and Peptides in Pictures: Imaging with MALDI Mass Spectrometry. Proteomics<\/i> 2008<\/b>, 8<\/i>, 3785\u20133800.<\/p>\n

(4) Schwartz, S. A.; Caprioli, R. M. Imaging Mass Spectrometry: Viewing the Future. Methods Mol. Biol.<\/i> 2010<\/b>, 656<\/i>, 3\u201319.<\/p>\n

(5) Chughtai, K.; Heeren, R. M. Mass Spectrometric Imaging for Biomedical Tissue Analysis. Chem. Rev.<\/i> 2010<\/b>, 110<\/i>, 3237\u20133277.<\/p>\n

(6) van Hove, E. R. A.; Smith, D. F.; Heeren, R. M. A Concise Review of Mass Spectrometry Imaging. J. Chromatogr. A<\/i> 2010<\/b>, 1217<\/i>, 3946\u20133954.<\/p>\n

(7) Seeley, E. H.; Caprioli, R. M. MALDI Imaging Mass Spectrometry of Human Tissue: Method Challenges and Clinical Perspectives. Trends Biotechnol<\/i> 2011<\/b>.<\/p>\n

(8) Seeley, E. H.; Schwamborn, K.; Caprioli, R. M. Imaging of Intact Tissue Sections: Moving Beyond the Microscope. J. Biol. Chem.<\/i> 2011<\/b>, 286<\/i>, 25459\u201325466.<\/p>\n

(9) Seeley, E. H.; Caprioli, R. M. 3D Imaging by Mass Spectrometry: a New Frontier. Anal. Chem.<\/i> 2012<\/b>.<\/p>\n

(10) Lanni, E. J.; Rubakhin, S. S.; Sweedler, J. V. Mass Spectrometry Imaging and Profiling of Single Cells. Journal of Proteomics<\/i> 2012<\/b>, 75<\/i>, 5036\u20135051.<\/p>\n

(11) Norris, J. L.; Caprioli, R. M. Analysis of Tissue Specimens by Matrix-Assisted Laser Desorption\/Ionization Imaging Mass Spectrometry in Biological and Clinical Research. Chem. Rev.<\/i> 2013<\/b>, 113<\/i>, 2309\u20132342.<\/p>\n

(12) Ellis, S. R.; Bruinen, A. L.; Heeren, R. M. A. A Critical Evaluation of the Current State-of-the-Art in Quantitative Imaging Mass Spectrometry. Anal. Bioanal. Chem.<\/i> 2013<\/b>, 406<\/i>, 1275\u20131289.<\/p>\n

(13) Legres, L. G.; Janin, A.; Masselon, C.; Bertheau, P. Beyond Laser Microdissection Technology: Follow the Yellow Brick Road for Cancer Research. Am J Cancer Res<\/i> 2014<\/b>, 4<\/i>, 1\u201328.<\/p>\n

(14) Gessel, M. M.; Norris, J. L.; Caprioli, R. M. MALDI Imaging Mass Spectrometry: Spatial Molecular Analysis to Enable a New Age of Discovery. Journal of Proteomics<\/i> 2014<\/b>, 107<\/i>, 71\u201382.<\/p>\n

(15) Spengler, B. Mass Spectrometry Imaging of Biomolecular Information. Anal. Chem.<\/i> 2015<\/b>, 87<\/i>, 64\u201382.<\/p>\n","protected":false},"excerpt":{"rendered":"

(1) Juhasz, P.; Costello, C. E. Generation of Large Radical Ions From Oligometallocenes by Matrix-Assisted Laser Desorption Ionization. 1993, 7, 343\u2013351. (2) Grigorean, G.; Carey, R. I.; Amster, I. J. Studies of Exchangeable Protons in the Matrix-Assisted Laser Desorption\/Ionization Process. European Mass Spectrometry 1996. (3) Cramer, R.; Hillenkamp, F.; Haglund, R. F., Jr. Infrared Matrix-Assisted … <\/p>\n

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