{"id":2710,"date":"2022-12-24T16:36:42","date_gmt":"2022-12-24T22:36:42","guid":{"rendered":"https:\/\/kermitmurray.com\/msblog\/?page_id=2710"},"modified":"2022-12-25T12:55:35","modified_gmt":"2022-12-25T18:55:35","slug":"mastodon-metabolomics","status":"publish","type":"page","link":"https:\/\/kermitmurray.com\/msblog\/links\/social-feeds\/mastodon-feeds\/mastodon-metabolomics\/","title":{"rendered":"Mastodon Metabolomics"},"content":{"rendered":"\n<div class=\"wp-block-caxton-grid relative\"><div class=\"absolute absolute--fill\"><div class=\"absolute absolute--fill cover bg-center\" style=\"background-color:;background-image:linear-gradient( );\"><\/div><div class=\"absolute absolute--fill\" style=\"background-color:;background-image:linear-gradient( );opacity:1;\"><\/div><\/div><div class=\"relative caxton-columns caxton-grid-block\" style=\"padding-top:0;padding-left:0;padding-bottom:0;padding-right:0;grid-template-columns:repeat(12, 1fr)\" data-tablet-css=\"padding-left:em;padding-right:em;\" data-mobile-css=\"padding-left:em;padding-right:em;\">\n<div class=\"wp-block-caxton-section relative\" style=\"grid-area:span 1\/span 8\"><div class=\"absolute absolute--fill\"><div class=\"absolute absolute--fill cover bg-center\" style=\"background-color:;background-image:linear-gradient( );\"><\/div><div class=\"absolute absolute--fill\" style=\"background-color:;background-image:linear-gradient( );opacity:1;\"><\/div><\/div><div class=\"relative caxton-section-block\" style=\"padding-top:5px;padding-left:5px;padding-bottom:5px;padding-right:5px\" data-mobile-css=\"padding-left:1em;padding-right:1em;\" data-tablet-css=\"padding-left:1em;padding-right:1em;\">\n<p><a href=\"https:\/\/mstdn.science\/tags\/Metabolomics\" target=\"_blank\" rel=\"noreferrer noopener\"><strong>#Metabolomics<\/strong><\/a><\/p>\n<\/div><\/div>\n\n\n\n<div class=\"wp-block-caxton-section relative\" style=\"grid-area:span 1\/span 4\"><div class=\"absolute absolute--fill\"><div class=\"absolute absolute--fill cover bg-center\" style=\"background-color:;background-image:linear-gradient( );\"><\/div><div class=\"absolute absolute--fill\" style=\"background-color:;background-image:linear-gradient( );opacity:1;\"><\/div><\/div><div class=\"relative caxton-section-block\" style=\"padding-top:5px;padding-left:5px;padding-bottom:5px;padding-right:5px\" data-mobile-css=\"padding-left:1em;padding-right:1em;\" data-tablet-css=\"padding-left:1em;padding-right:1em;\">\n<p><strong><a href=\"https:\/\/mstdn.science\/tags\/Metabolomics.rss\" target=\"_blank\" rel=\"noreferrer noopener\">RSS<\/a><\/strong><\/p>\n<\/div><\/div>\n<\/div><\/div>\n\n\n<ul class=\"has-dates has-authors has-excerpts wp-block-rss\"><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/pubeurope.com\/@europesays\/116768412272215975'>(no title)<\/a><\/div><time datetime=\"2026-06-18T01:02:52-05:00\" class=\"wp-block-rss__item-publish-date\">June 18, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">https:\/\/www.europesays.com\/3070387\/ Tagging the Tank: Ubiquitin-mediated clearance of cellular energy reserves #Cell(biology) #Energy #general #Glycobiology #LifeSciences #Metabolomics<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mastodon.social\/@rmflight\/116766625058249006'>(no title)<\/a><\/div><time datetime=\"2026-06-17T17:28:21-05:00\" class=\"wp-block-rss__item-publish-date\">June 17, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">New co-authored manuscript on liver cancer multi-omics:Integrated Multi-omic Analyses Reveal Novel Gene-Metabolite Relationships in Human Steatohepatitic Hepatocellular CarcinomaAnspach et al., https:\/\/www.jlr.org\/article\/S0022-2275(26)00107-0\/fulltext8 patients, *paired samples* of cancer and adjacent normal!! (made the statistics so nice to work with and look for correlations between rna-seq and metabolomics).#Bioinformatics #Metabolomics #RNASeq<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mstdn.science\/@deNBI\/116736815183442505'>(no title)<\/a><\/div><time datetime=\"2026-06-12T11:07:18-05:00\" class=\"wp-block-rss__item-publish-date\">June 12, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">Looking for your next career step in an international scientific hub? \ud83c\udf0dIPB Halle is seeking a Research Associate in Computational #Metabolomics. Help us understand the biochemical basis of plant resilience\ud83c\udf93 Requires a Master\u2019s or PhD in CS, Bioinformatics, or a related field \ud83e\udd1d Open leadership culture, tailored career development, and flexible &amp; remote work, 30 days leave.\ud83d\udd17 Apply here: https:\/\/www.denbi.de\/de-nbi-jobs-portal\/2107-research-associate-computational-metabolomics-m-f-d-7-2026#Bioinformatics #Jobs #Research #PlantBiochemistry<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mastodon.social\/@rmflight\/116683170154880996'>(no title)<\/a><\/div><time datetime=\"2026-06-02T23:44:40-05:00\" class=\"wp-block-rss__item-publish-date\">June 2, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">Everytime I think that uploaded #metabolomics data can&#039;t get any weirder, I find something else.Today, it&#039;s 1 sample out of 64 that has negative values. ONE out of 64 that has negative values. Unless something weird was done in processing, either all of them should contain negative values or none of them should. \ud83e\udd26\u200d\u2642\ufe0fAll missing for one sample, that sort of, might make sense. But 1 of 64 has negatives? WTF. And it&#039;s not just one value, it&#039;s 64 of 407.#bioinformatics<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mastodon.social\/@csbj\/116636323438415326'>(no title)<\/a><\/div><time datetime=\"2026-05-25T17:10:56-05:00\" class=\"wp-block-rss__item-publish-date\">May 25, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">\ud83d\udce2 Call for Papers: Computational Spatial Omics &#8211; Multimodal Strategies for Systems Biology and Biomedical Discovery\u23f3 Submission Deadline: 31 December 2026\ud83d\udd17 Submit your work: https:\/\/spj.science.org\/journal\/csbj\/si\/computational-spatial-omics#CallForPapers #SpatialOmics #SpatialTranscriptomics #SpatialProteomics #Metabolomics #Lipidomics #Multiomics #ComputationalBiology #SystemsBiology #Bioinformatics #AIinHealthcare #DigitalPathology #GraphNeuralNetworks #PrecisionMedicine<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mastodon.social\/@jpecol\/116631010045802624'>(no title)<\/a><\/div><time datetime=\"2026-05-24T18:39:40-05:00\" class=\"wp-block-rss__item-publish-date\">May 24, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">\u3010\ud83c\udf89Latest accepted article\u3011Marine heatwaves intensify competition between toxigenic microalgae and cultured macroalgae#HarmfulAlgalBloom | #InterspecificCompetition | #MarineHeatwave | #Metabolomics | #SeaweedAquaculture | #Toxicityhttps:\/\/doi.org\/10.1093\/jpe\/rtag108<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mstdn.business\/@AcademicEurope\/116611383749478557'>(no title)<\/a><\/div><time datetime=\"2026-05-21T07:28:26-05:00\" class=\"wp-block-rss__item-publish-date\">May 21, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">Job AlertResearch Associate in Computational Metabolomics (m\/f\/d)Location: Halle (Saale)Deadline 2026-06-30https:\/\/www.academiceurope.com\/ads\/research-associate-computational-metabolomics-m-f-d\/#hiring #ComputationalBiology #Metabolomics #Bioinformatics #PlantScience #Postdoc #PhD #DataScience #softwareengineering<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/rbfirehose.com\/2026\/05\/14\/from-molecules-to-meaning-a-search-engine-for-the-chemistry-of-life-uc-san-diego\/'>(no title)<\/a><\/div><time datetime=\"2026-05-14T12:05:00-05:00\" class=\"wp-block-rss__item-publish-date\">May 14, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">UC San Diego: From Molecules to Meaning: A Search Engine for the Chemistry of Life. \u201cAn international team led by researchers at University of California San Diego and University of California, Riverside has developed a free, web-based platform designed to make public metabolomics data more accessible.\u201d https:\/\/rbfirehose.com\/2026\/05\/14\/from-molecules-to-meaning-a-search-engine-for-the-chemistry-of-life-uc-san-diego\/<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mstdn.science\/@deNBI\/116554997341798029'>(no title)<\/a><\/div><time datetime=\"2026-05-11T08:28:38-05:00\" class=\"wp-block-rss__item-publish-date\">May 11, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">\ud83c\uddee\ud83c\uddf9 Greetings from Rome!Last week, the HUPO-PSI Spring Meeting at the CNR brought together the global community to advance open data standards for #proteomics and #metabolomics. \ud83e\uddec@deNBI was thrilled to be part of the discussions! We organized a successful workshop Metabolomics &amp; MS Data Standards fostering collaboration across the field. \ud83e\udd1dStandardization is key to reproducible science! \ud83d\ude80#HUPOPSI #OpenData #Bioinformatics #deNBI #Metabolomics #MassSpec #FAIRdata #ScienceEvents<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mastodon.social\/@rmflight\/116539665280478638'>(no title)<\/a><\/div><time datetime=\"2026-05-08T15:29:29-05:00\" class=\"wp-block-rss__item-publish-date\">May 8, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">Working with data from Metabolomics Workbench again, and it always feels like the data is yelling at me with the fields in all caps.Now that I&#039;ve double checked, the Protein Data Bank file format was like this too, all caps everywhere (even more so).#metabolomics #bioinformatics<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mastodon.social\/@jpecol\/116471920232780151'>(no title)<\/a><\/div><time datetime=\"2026-04-26T16:21:02-05:00\" class=\"wp-block-rss__item-publish-date\">April 26, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">\u3010\ud83c\udf89Latest accepted article\u3011#NativePlantInvasion mediates coupled homogenization of #SoilMetabolomes and microbial functional groups on the Qinghai-Tibetan Plateau#Allelopathy | #AlphaDiversity | #BetaDiversity | #BioticHomogenization | #Metabolomicshttps:\/\/doi.org\/10.1093\/jpe\/rtag090<\/div><\/li><li class='wp-block-rss__item'><div class='wp-block-rss__item-title'><a href='https:\/\/mastodon.social\/@sflorg\/116436901491374546'>(no title)<\/a><\/div><time datetime=\"2026-04-20T11:55:18-05:00\" class=\"wp-block-rss__item-publish-date\">April 20, 2026<\/time> <div class=\"wp-block-rss__item-excerpt\">Researchers have identified composite blood biomarkers\u2014specific combinations of proteins and metabolites\u2014that can reliably detect early stages of colorectal, lung, and ovarian cancers. #Oncology #Proteomics #Metabolomics #Pathology #sflorghttps:\/\/www.sflorg.com\/2026\/04\/ongy04202601.html<\/div><\/li><\/ul>\n\n\n<hr class=\"wp-block-separator has-alpha-channel-opacity is-style-wide\"\/>\n\n\n\n<h4 class=\"wp-block-heading\">Related Feeds<\/h4>\n\n\n<ul class=\"su-siblings\"><li class=\"page_item page-item-2712\"><a href=\"https:\/\/kermitmurray.com\/msblog\/links\/social-feeds\/mastodon-feeds\/mastodon-chemistry\/\">Mastodon Chemistry<\/a><\/li>\n<li class=\"page_item page-item-3092\"><a href=\"https:\/\/kermitmurray.com\/msblog\/links\/social-feeds\/mastodon-feeds\/mastodon-kkmurray\/\">Mastodon kkmurray<\/a><\/li>\n<li class=\"page_item page-item-3062\"><a href=\"https:\/\/kermitmurray.com\/msblog\/links\/social-feeds\/mastodon-feeds\/mastodon-kkmurray-rss\/\">Mastodon kkmurray RSS<\/a><\/li>\n<li class=\"page_item page-item-2717\"><a href=\"https:\/\/kermitmurray.com\/msblog\/links\/social-feeds\/mastodon-feeds\/mastodon-lipidomics\/\">Mastodon Lipidomics<\/a><\/li>\n<li class=\"page_item page-item-2471\"><a href=\"https:\/\/kermitmurray.com\/msblog\/links\/social-feeds\/mastodon-feeds\/mastodon-ms\/\">Mastodon Mass Spectrometry<\/a><\/li>\n<li class=\"page_item page-item-2714\"><a href=\"https:\/\/kermitmurray.com\/msblog\/links\/social-feeds\/mastodon-feeds\/mastodon-physics\/\">Mastodon Physics<\/a><\/li>\n<li class=\"page_item page-item-2699\"><a href=\"https:\/\/kermitmurray.com\/msblog\/links\/social-feeds\/mastodon-feeds\/mastodon-proteomics\/\">Mastodon Proteomics<\/a><\/li>\n<li class=\"page_item page-item-2719\"><a href=\"https:\/\/kermitmurray.com\/msblog\/links\/social-feeds\/mastodon-feeds\/mastodon-spectroscopy\/\">Mastodon Spectroscopy<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Related Feeds<\/p>\n","protected":false},"author":1,"featured_media":2502,"parent":2748,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"class_list":["post-2710","page","type-page","status-publish","has-post-thumbnail","hentry","entry"],"_links":{"self":[{"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/pages\/2710","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/comments?post=2710"}],"version-history":[{"count":1,"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/pages\/2710\/revisions"}],"predecessor-version":[{"id":2711,"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/pages\/2710\/revisions\/2711"}],"up":[{"embeddable":true,"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/pages\/2748"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/media\/2502"}],"wp:attachment":[{"href":"https:\/\/kermitmurray.com\/msblog\/wp-json\/wp\/v2\/media?parent=2710"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}